ExperimentList
Experiment #10
Name: fiedler-2008-1
pubmed 18498752 [primary-reference]
Host Organism: in vitro (taxid: -1)
Interaction detection method:
Name: inferred by author
psi-mi MI:0363 [identical object]
Participant identification method:
Name: predetermined
psi-mi MI:0396 [identical object]
publication year 2008
author-list Fiedler et al.

InteractorList
Interactor #1
Name: Pygo1: Pygopus homolog 1 (gene name: PYGO1)
uniprot knowledge base Q9Y3Y4 [identical object]
refseq NP_056432.1 [identical object]
ensembl ENSG00000171016 [gene product]
Interactor Type:
Name: protein
psi-mi MI:0326 [identical object]
Organism: Human
Interactor #2
Name: Bcl9: B-cell CLL/lymphoma 9 protein (gene name: BCL9)
uniprot knowledge base O00512 [identical object]
refseq NP_004317.2 [identical object]
ensembl ENSG00000116128 [gene product]
Interactor Type:
Name: protein
psi-mi MI:0326 [identical object]
Organism: Human
Interactor #3
Name: H3K4me2: Histone H3 peptide
intact EBI-6146769 [identical object]
Interactor Type:
Name: peptide
psi-mi MI:0327 [identical object]
Organism: Human
Sequence: ARTKQTA

InteractionList
Interaction #4
Name: Pygo1-Bcl9
wwpdb 2VPD [identical object]
intact EBI-6142511 [identical object]
Experiments: fiedler-2008-1
Participants:
Participant #6
Pygo1
Biological Role:
Name: allosteric molecule
psi-mi MI:1159 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Participant #7
Bcl9
Biological Role:
Name: allosteric effector
psi-mi MI:1160 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: direct interaction
psi-mi MI:0407
Interaction attributes:
cooperative mechanism allostery
affected interaction H3K4me2-Pygo1_Bcl9
cooperative effect outcome positive cooperative effect
allosteric molecule Participant#6
allosteric effector Participant#7
allosteric mechanism allosteric change in structure
allosteric response allosteric k-type response
allostery type heterotropic allostery
cooperative effect value 2.58
Interaction #5
Name: H3K4me2-Pygo1_Bcl9
wwpdb 2VPE [identical object]
intact EBI-6146783 [identical object]
Experiments: fiedler-2008-1
Participants:
Participant #8
Pygo1-Bcl9
Biological Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Participant #9
H3K4me2
Biological Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Feature #21 dimethylated residue () [ 4 .. 4 ]
prerequisite-ptm
Interaction Type:
Name: direct interaction
psi-mi MI:0407