ExperimentList
Experiment #30
Name: cheng-2006-1
pubmed 16707497 [primary-reference]
Host Organism: in vitro (taxid: -1)
Interaction detection method:
Name: inferred by author
psi-mi MI:0363 [identical object]
Participant identification method:
Name: predetermined
psi-mi MI:0396 [identical object]
publication year 2006
author-list Cheng et al.
Experiment #31
Name: stevenson-2002-1
pubmed 12081504 [primary-reference]
Host Organism: in vitro (taxid: -1)
Interaction detection method:
Name: inferred by author
psi-mi MI:0363 [identical object]
Participant identification method:
Name: predetermined
psi-mi MI:0396 [identical object]
publication year 2002
author-list Stevenson et al.
Experiment #32
Name: jeffrey-1995-1
pubmed 7630397 [primary-reference]
Host Organism: in vitro (taxid: -1)
Interaction detection method:
Name: inferred by author
psi-mi MI:0363 [identical object]
Participant identification method:
Name: predetermined
psi-mi MI:0396 [identical object]
publication year 1995
author-list Jeffrey et al.
Experiment #33
Name: Brown-1999-1
pubmed 10559988 [primary-reference]
Host Organism: in vitro (taxid: -1)
Interaction detection method:
Name: inferred by author
psi-mi MI:0363 [identical object]
Participant identification method:
Name: predetermined
psi-mi MI:0396 [identical object]
publication year 1999
author-list Brown et al.
Experiment #34
Name: russo-1996-1
pubmed 8756328 [primary-reference]
Host Organism: in vitro (taxid: -1)
Interaction detection method:
Name: inferred by author
psi-mi MI:0363 [identical object]
Participant identification method:
Name: predetermined
psi-mi MI:0396 [identical object]
publication year 1996
author-list Russo et al.

InteractorList
Interactor #1
Name: Cdk2: Cyclin-dependent kinase 2 (gene name: CDK2) (synonym: p33 protein kinase)
uniprot knowledge base P24941 [identical object]
refseq NP_001789.2 [identical object]
ensembl ENSG00000123374 [gene product]
Interactor Type:
Name: protein
psi-mi MI:0326 [identical object]
Organism: Human
Interactor #2
Name: Ccna2: Cyclin-A2 (gene name: CCNA2) (synonym: CCN1)
uniprot knowledge base P20248 [identical object]
refseq NP_001228.1 [identical object]
ensembl ENSG00000145386 [gene product]
Interactor Type:
Name: protein
psi-mi MI:0326 [identical object]
Organism: Human
Interactor #3
Name: Cdk7: Cyclin-dependent kinase 7 (gene name: CDK7) (synonym: CDK-activating kinase 1)
uniprot knowledge base P50613 [identical object]
refseq NP_001790.1 [identical object]
ensembl ENSG00000134058 [gene product]
Interactor Type:
Name: protein
psi-mi MI:0326 [identical object]
Organism: Human
Interactor #4
Name: Cdc6: Cell division control protein 6 homolog (gene name: CDC6) (synonym: Cdc18-related protein)
uniprot knowledge base Q99741
refseq NP_001245.1 [identical object]
ensembl ENSG00000094804 [gene product]
Interactor Type:
Name: protein
psi-mi MI:0326 [identical object]
Organism: Human

InteractionList
Interaction #5
Name: CyclinA-Cdk2
wwpdb 1FIN [identical object]
intact EBI-1030422 [identical object]
Experiments: cheng-2006-1
Participants:
Participant #13
Cdk2
Biological Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Participant #14
Ccna2
Biological Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: direct interaction
psi-mi MI:0407
Interaction attributes:
cooperative mechanism pre-assembly
affected interaction CyclinA_pCdk2-Cdc6
cooperative effect outcome positive cooperative effect
pre-assembly response configurational pre-organization
Interaction #6
Name: CyclinA-Cdk2
wwpdb 1FIN [identical object]
intact EBI-1030422 [identical object]
Experiments: stevenson-2002-1 jeffrey-1995-1
Participants:
Participant #15
Cdk2
Biological Role:
Name: allosteric molecule
psi-mi MI:1159 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Participant #16
Ccna2
Biological Role:
Name: allosteric effector
psi-mi MI:1160 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: direct interaction
psi-mi MI:0407
Interaction attributes:
cooperative mechanism allostery
affected interaction CyclinA_pCdk2-Cdc6
cooperative effect outcome positive cooperative effect
allosteric molecule Participant#15
allosteric effector Participant#16
allosteric mechanism allosteric change in structure
allosteric response allosteric v-type response
allostery type heterotropic allostery
Interaction #7
Name: CyclinA-Cdk2
wwpdb 1FIN [identical object]
intact EBI-1030422 [identical object]
Experiments: stevenson-2002-1 jeffrey-1995-1
Participants:
Participant #17
Cdk2
Biological Role:
Name: allosteric molecule
psi-mi MI:1159 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Participant #18
Ccna2
Biological Role:
Name: allosteric effector
psi-mi MI:1160 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: direct interaction
psi-mi MI:0407
Interaction attributes:
cooperative mechanism allostery
affected interaction CyclinA_pCdk2-Cdc6
cooperative effect outcome positive cooperative effect
allosteric molecule Participant#17
allosteric effector Participant#18
allosteric mechanism allosteric change in structure
allosteric response allosteric k-type response
allostery type heterotropic allostery
Interaction #8
Name: CyclinA-Cdk2
wwpdb 1FIN [identical object]
intact EBI-1030422 [identical object]
Experiments: jeffrey-1995-1
Participants:
Participant #19
Cdk2
Biological Role:
Name: allosteric molecule
psi-mi MI:1159 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Participant #20
Ccna2
Biological Role:
Name: allosteric effector
psi-mi MI:1160 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: direct interaction
psi-mi MI:0407
Interaction attributes:
cooperative mechanism allostery
affected interaction CyclinA_Cdk2-Cdk7
affected interaction CyclinA_Cdk2-Cdk7
affected interaction CyclinA_Cdk2-Cdk7
cooperative effect outcome positive cooperative effect
allosteric molecule Participant#19
allosteric effector Participant#20
allosteric mechanism allosteric change in structure
allosteric response allosteric k-type response
allostery type heterotropic allostery
Interaction #9
Name: CyclinA_Cdk2-Cdk7
wwpdb 1JST [identical object]
dip DIP57013E [identical object]
Experiments: stevenson-2002-1 Brown-1999-1
Participants:
Participant #21
CyclinA-Cdk2
Biological Role:
Name: enzyme target
psi-mi MI:0502 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Feature #50 phosphorylated residue () [ 160 .. 160 ]
resulting-ptm
participant-ref Participant#13
Participant #22
Cdk7
Biological Role:
Name: enzyme
psi-mi MI:0501 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: phosphorylation reaction
psi-mi MI:0217
Interaction attributes:
cooperative mechanism allostery
affected interaction CyclinA_pCdk2-Cdc6
cooperative effect outcome positive cooperative effect
allosteric molecule Participant#13
allosteric post-translational modification Feature#50
allosteric mechanism allosteric change in structure
allosteric response allosteric k-type response
allostery type heterotropic allostery
Interaction #10
Name: CyclinA_Cdk2-Cdk7
wwpdb 1JST [identical object]
dip DIP57013E [identical object]
Experiments: stevenson-2002-1 russo-1996-1
Participants:
Participant #23
CyclinA-Cdk2
Biological Role:
Name: enzyme target
psi-mi MI:0502 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Feature #51 phosphorylated residue () [ 160 .. 160 ]
resulting-ptm
participant-ref Participant#13
Participant #24
Cdk7
Biological Role:
Name: enzyme
psi-mi MI:0501 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: phosphorylation reaction
psi-mi MI:0217
Interaction attributes:
cooperative mechanism allostery
affected interaction CyclinA_pCdk2-Cdc6
cooperative effect outcome positive cooperative effect
allosteric molecule Participant#13
allosteric post-translational modification Feature#51
allosteric mechanism allosteric change in structure
allosteric response allosteric v-type response
allostery type heterotropic allostery
Interaction #11
Name: CyclinA_Cdk2-Cdk7
wwpdb 1JST [identical object]
dip DIP57013E [identical object]
Experiments: cheng-2006-1 Brown-1999-1
Participants:
Participant #25
CyclinA-Cdk2
Biological Role:
Name: enzyme target
psi-mi MI:0502 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Feature #52 phosphorylated residue () [ 160 .. 160 ]
resulting-ptm
participant-ref Participant#13
Participant #26
Cdk7
Biological Role:
Name: enzyme
psi-mi MI:0501 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Interaction Type:
Name: phosphorylation reaction
psi-mi MI:0217 [identical object]
Interaction attributes:
cooperative mechanism pre-assembly
affected interaction CyclinA_pCdk2-Cdc6
cooperative effect outcome positive cooperative effect
pre-assembly response altered physicochemical compatibility
Interaction #12
Name: CyclinA_pCdk2-Cdc6
wwpdb 2CCI [identical object]
Experiments: cheng-2006-1
Participants:
Participant #27
CyclinA-Cdk2
Biological Role:
Name: enzyme
psi-mi MI:0501 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Feature #53 phosphorylated residue () [ 160 .. 160 ]
prerequisite-ptm
participant-ref Participant#13
Participant #28
Cdc6
Biological Role:
Name: enzyme target
psi-mi MI:0502 [identical object]
Experimental Role:
Name: unspecified role
psi-mi MI:0499 [identical object]
Feature #54 phosphorylated residue () [ 74 .. 74 ]
resulting-ptm
Interaction Type:
Name: phosphorylation reaction
psi-mi MI:0217 [identical object]